The genetic basis of diseases: travel to the world of heredity and health
Section 1: Fundamentals of genetics and heredity
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DNA: Drawing of life.
- DNA (deoxyribonucleic acid) is a molecule containing genetic instructions for the development, functioning and reproduction of all known living organisms and many viruses. It is a double spiral consisting of nucleotides, each of which contains deoxyribose (sugar), phosphate group and nitrogen base (adenine (a), thyme (t), cytosine (C) and guanine (G)).
- The bases are connected in pairs (A C T, C G), forming the “steps” of the spiral. This sequence of bases determines genetic information.
- DNA is packed in chromosomes that are in the nucleus of each cell. A person has 23 pairs of chromosomes inherited from parents.
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Genes: units of heredity.
- The gene is a DNA area encoding a certain protein or functional RNA. Proteins perform many functions in the body, from catalysis of chemical reactions to the construction of cells and tissues.
- Each gene has a certain location on the chromosome called locus.
- Most genes exist in several versions called alleles.
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Heredity: transmission of genetic information.
- Heredity is the transfer of genetic information from parents to descendants.
- During sexual reproduction, descendants inherit half the chromosomes from each parent.
- The combination of alleles inherited from parents determines the human genotype.
- The genotype interacts with the environment, determining the phenotype – observed human characteristics (for example, eye color, growth, tendency to certain diseases).
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Mutations: a source of genetic diversity and disease.
- Mutations are changes in the DNA sequence. They can occur spontaneously or under the influence of environmental factors (for example, radiation, chemicals).
- Mutations can be harmful, useful or neutral.
- Harmful mutations can lead to the development of genetic diseases.
- There are various types of mutations:
- Particular mutations: a change in one nucleotide.
- Deletions: Loss of part of the DNA.
- Inersion: insertion of additional DNA.
- Chromosomal aberrations: a change in the structure or quantity of chromosomes.
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Epigenetics: inherited changes without changing DNA.
- Epigenetics is the study of inherited changes in genes expression, which are not associated with changes in the sequence of DNA.
- Epigenetic mechanisms include:
- DNA methylation: adding a methyl group to DNA, which usually suppresses the expression of the gene.
- Histonian modifications: chemical changes in histones (proteins around which DNA are wrapped), which affect the availability of DNA for transcription.
- Microrm: small RNA molecules that regulate the expression of genes.
- Epigenetic changes can be caused by environmental factors (for example, nutrition, stress, toxins) and are passed down from generation to generation.
Section 2: Genetics of diabetes
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Types of diabetes and their genetic predisposition.
- Diabetes mellitus is a group of metabolic diseases characterized by chronic hyperglycemia (increased blood glucose) due to insulin secretion defects, insulin or both of these factors.
- The main types of diabetes:
- Type 1 diabetes (autoimmune diabetes): characterized by autoimmune destruction of insulin-producing pancreatic beta cells.
- Type 2 diabetes: characterized by insulin resistance and progressive dysfunction of beta cells.
- Gestational diabetes: develops during pregnancy.
- Other types of diabetes: include diabetes caused by genetic defects, drugs or other diseases.
- Type 1 diabetes has a strong genetic predisposition, especially related to the genes of the main histocompatibility complex (MHC), in particular HLA genes.
- Type 2 diabetes is a more complex disease with many genetic and environmental risk factors. Heredity plays a significant role, but is not the only determining factor.
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Genes associated with type 1 diabetes.
- HLA-Gen (Human Leukocyte Antigen): HLA-Genes encode proteins that play a key role in the immune system. Certain options for HLA genes (for example, HLA-DR3, HLA-DR4) significantly increase the risk of type 1 diabetes. These genes affect the ability of the immune system to distinguish between their own and other people’s cells, and their incorrect work can lead to an autoimmune attack on beta cells.
- INS (Insulin): Variations in the insulin genus can affect the function of beta cells and a predisposition to type 1 diabetes.
- CTLA4 (Cytotoxic T-Lymphocyte Antigen 4): This gene encodes a protein that regulates the activity of T-lymphocytes. Certain CTLA4 options can lead to a violation of the regulation of the immune response and an increase in the risk of autoimmune diseases, including type 1 diabetes.
- PTPN22 (Protein Tyrosine Phosphatase Non-receptor type 22): This gene encodes phosphatase, which regulates the activation of T-lymphocytes. The PTPN22 option, called the R620W, is one of the most powerful non-Hla genetic risk factors for type 1 diabetes.
- IL2RA (Interleukin 2 Receptor Alpha): This gene encodes part of the Interleukin-2 receptor, which plays an important role in the regulation of the immune response. Variations in IL2RA can affect the function of T-lymphocytes and a predisposition to type 1 diabetes.
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Genes associated with type 2 diabetes.
- Type 2 diabetes is a polygenic disease, which means that many genes contribute to its development. Some of the most studied genes include:
- TCF7L2 (Transcription Factor 7-Like 2): This gene encodes a transcription factor that plays an important role in regulating the level of glucose in the blood. Variations in TCF7L2 are one of the most common genetic risk factors for type 2 diabetes.
- PPARG (Peroxisome Proliferator-Activated Receptor Gamma): This gene encodes a nuclear receptor that regulates the expression of genes involved in the metabolism of glucose and lipids. PPARG is a target for some drugs used to treat type 2 diabetes.
- KCNJ11 (Potassium Inwardly Rectifying Channel Subunit J11): This gene encodes part of the potassium channel, which plays an important role in the regulation of insulin secretion. Variations in KCNJ11 can affect the function of beta cells and a predisposition to type 2 diabetes.
- IRS1 (Insulin Receptor Substrate 1): This gene encodes a protein that is involved in the transmission of the signal from the insulin receptor. Variations in IRS1 can lead to a decrease in sensitivity to insulin.
- GCK (Glucokinase): This gene encodes glucokinase, an enzyme that plays an important role in the regulation of insulin secretion in response to an increase in blood glucose. Variations in GCK can lead to a violation of the function of beta cells and a predisposition to type 2 diabetes.
- Type 2 diabetes is a polygenic disease, which means that many genes contribute to its development. Some of the most studied genes include:
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The interaction of genetics and the environment in the development of diabetes.
- A genetic predisposition to diabetes is not the only factor that determines the development of the disease. Environmental factors play an important role in the launch and progression of diabetes.
- Environmental factors that contribute to the development of diabetes:
- Obesity: Excess weight and obesity, especially visceral fat, are associated with resistance to insulin and an increased risk of type 2 diabetes.
- Inal meals: High consumption of sugar, processed products and a lack of fiber can contribute to the development of insulin resistance and beta cell dysfunction.
- Low physical activity: The lack of physical activity contributes to obesity and insulin resistance.
- Stress: Chronic stress can affect the level of glucose in the blood and increase the risk of type 2 diabetes.
- Gestational diabetes: The presence of gestational diabetes during pregnancy increases the risk of developing type 2 diabetes in the mother in the future, and also increases the risk of diabetes in the child.
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Genetic testing and predicting the risk of diabetes.
- Genetic testing can be used to assess the risk of diabetes, especially in people with the family history of this disease.
- Genetic tests can identify certain variants of genes associated with diabetes of the 1st and 2nd type.
- The results of genetic testing can help in the development of individual strategies for the prevention and early detection of diabetes.
- It is important to note that genetic testing is not diagnostic and cannot accurately predict whether a person will develop diabetes. It provides information about a genetic predisposition that should be interpreted in the context of other risk factors (for example, lifestyle, family history).
Section 3: Cancer Genetics
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Fundamentals of oncogenesis: genetic changes and cancer development.
- Cancer is a group of diseases characterized by uncontrolled growth and the spread of abnormal cells.
- Cancer development is a multi -stage process that usually includes the accumulation of genetic changes in cells.
- These genetic changes can lead to:
- Activations of oncogenes: genes that contribute to uncontrolled growth and cell division.
- Inactivation of tumor-soup genes: genes that control the growth and division of cells and prevent the formation of tumors.
- Violation of genomic stability: violation of DNA restoration mechanisms and maintaining the integrity of the genome.
- Evaluation from apoptosis (programmable cell death): Cells with damaged DNA do not die, but continue to share.
- The acquisition of the ability to angiogenesis (the formation of new blood vessels): the tumor receives the necessary nutrients and oxygen for growth.
- The acquisition of the ability to metastasis (distribution to other organs): the tumor can form new foci in distant parts of the body.
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Types of genetic changes in cancer.
- Somatic mutations: Mutations that occur in the cells of the body after conception and are not inherited. Somatic mutations are the main reason for the development of most types of cancer. They can be caused by environmental factors (for example, radiation, chemicals, viruses) or errors during DNA replication.
- Herminal mutations (hereditary mutations): Mutations that are present in the germ cells (spermatozoa or eggs) and are inherited by descendants. Hermination mutations can significantly increase the risk of developing certain types of cancer.
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Oncogenes and tumor-soup genes.
- Oncogenes:
- The mechanism of action: Oncogenes are genes that, in a mutated or super -expression state, contribute to uncontrolled growth and cell division. They often encode proteins that are involved in the transmission of growth signals, regulation of the cell cycle or apoptosis.
- Examples:
- RAS: The RAS genes family encodes GTP-binding proteins, which are involved in the transmission of growth signals from the receptors on the surface of the cage to the nucleus. Mutations in RAS are often found in various types of cancer, including lung cancer, pancreatic cancer and colon cancer.
- MYC: The Myc gene encodes a transcription factor that regulates the expression of genes involved in growth, division and cell apoptosis. Myc super -expression is often found in various types of cancer, including lymphoma, leukemia and breast cancer.
- ERBB2 (HER2): The ERBB2 gene encodes a tyrosinkinase receptor, which is involved in the transmission of growth signals. ERBB2 super -expression is often found in breast cancer and stomach cancer.
- Tumor Suppressors genes:
- The mechanism of action: Tumor-soup genes are genes that control the growth and division of cells and prevent tumors. They often encode proteins that are involved in the control of the cell cycle, restoration of DNA or apoptosis.
- Examples:
- TP53: The TP53 gene encodes a transcription factor that plays a key role in protecting the genome from damage. TP53 is activated in response to DNA damage and can cause a cell cycle stop, activation of DNA restoration or apoptosis. Mutations in TP53 are one of the most common genetic changes in cancer.
- RB1: The RB1 gene encodes retinoblastoma protein (PRB), which regulates the cell cycle. PRB is associated with transcription factors E2F and prevents their activation, thereby suppressing cell division. Mutations in RB1 are often found with retinoblastoma (retinal cancer) and other types of cancer.
- BRCA1 I BRCA2: BRCA1 and BRCA2 genes encode proteins that are involved in DNA restoration. Mutations in BRCA1 and BRCA2 significantly increase the risk of developing breast cancer, ovarian cancer and other types of cancer.
- Oncogenes:
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Hereditary cancer syndromes.
- Hereditary cancer syndromes are conditions characterized by an increased risk of developing certain types of cancer, due to the inheritance of mutations in genes that control the growth and division of cells.
- Examples of hereditary cancer syndromes:
- Hereditary breast and ovary cancer (HBOC): associated with mutations in the genes of BRCA1 and BRCA2. Women with mutations in these genes have a significantly increased risk of developing breast cancer and ovaries, as well as an increased risk of developing other types of cancer, such as prostate cancer and pancreatic cancer.
- Lynch Syndrome (hereditary non -facade colorectal cancer, HNPC): It is associated with mutations in the genes of the DNA reparation system (for example, MLH1, MSH2, MSH6, PMS2). People with Lynch syndrome have an increased risk of developing colon cancer, endometrial cancer, stomach cancer and other types of cancer.
- Family adenomatous polyposis (FAP): associated with mutations in the APC gene. People with FAP develop many polyps in the colon, which significantly increases the risk of developing colon cancer.
- Li-Fraumeni syndrome: associated with mutations in the TP53 gene. People with Li-Franean syndrome have an increased risk of developing various types of cancer, including breast cancer, sarcoma, leukemia and brain tumors.
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Genetic testing for cancer.
- Genetic testing can be used for:
- Identification of hereditary mutations: To assess the risk of cancer development in people with the family history of this disease.
- Cancer diagnostics: To identify somatic mutations in tumor cells, which can help in choosing the most effective therapy.
- Forecasting the response to treatment: To determine whether the tumor will be sensitive to certain drugs.
- Types of genetic testing for cancer:
- Testing herminal mutations: It is carried out to identify hereditary mutations in genes associated with an increased risk of cancer. This testing is usually carried out on a blood sample or saliva.
- Testing somatic mutations: It is carried out to identify mutations in tumor cells. This testing is usually carried out on a sample of tumor tissue obtained during a biopsy or surgical removal of a tumor.
- Genetic testing can be used for:
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Targeted therapy of cancer based on the genetic profile of the tumor.
- Targeted therapy is a type of cancer treatment, which is aimed at specific molecules or signaling paths involved in the growth and spread of tumor cells.
- Genetic tumor testing can help in choosing the most effective targeted therapy.
- Examples of targeted therapy:
- EGFR inhibitors: They are used to treat lung cancer, colon cancer and other types of cancer, in which mutations in the EGFR gene (an epidermal growth factor) are found.
- Braf inhibitors: They are used for the treatment of melanoma and other types of cancer in which mutations are found in the Braf (B-Raf Proto-Oncogene, Serine/Threonine Kinase).
- Her2 inhibitors: They are used to treat breast cancer and stomach cancer, in which the Her2 super -expression is detected (the receptor of the epidermal growth factor 2).
- PARP inhibitors: They are used to treat ovarian cancer, breast cancer and prostate cancer, in which mutations are found in the BRCA1 or BRCA2 genes.
Section 4: Other diseases and genetics
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Cardiovascular diseases.
- Corny heart (coronary heart disease): A polygenic disease where the contribution is made by genes that regulate cholesterol (for example, LDLR, APOB, PCSK9), blood pressure (for example, ACE, Agt) and inflammation (for example, IL6, TNF-α). Family hypercholesterolemia is an example of a monogenic disease that significantly increases the risk of early development of coronary heart disease.
- Cardiomyopathy: Diseases of the heart muscle. Hypertrophic cardiomyopathy (GKMP) is often caused by mutations in genes encoding sarcomer proteins (for example, MYH7, MyBPC3, TNNT2). Dilatation cardiomyopathy (DCMP) may be associated with mutations in the Lamin A/s genes (LMNA) and Desmina (Des).
- Congenital heart defects: Can be caused by chromosomal abnormalities (for example, Down syndrome, Turner syndrome) or mutations in genes regulating the development of the heart (for example, NKX2-5, GATA4).
- Arrhythmias: The elongated QT (LQTS) interval is caused by mutations in genes encoding the ion channels of the heart (for example, KCNQ1, KCNH2, SCN5A).
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Neurological diseases.
- Alzheimer’s disease: Forms with the early beginning (up to 65 years) are often associated with mutations in the Genes App, Psen1 and Psen2. The risk of developing the late form of Alzheimer’s disease increases with the presence of ε4 of the APOE gene.
- Parkinson’s disease: Mutations in the genes of SNCA, LRRK2, Park2, Pink1 and DJ-1 are associated with the development of Parkinson’s disease, especially in cases with the early beginning.
- Scattered sclerosis: It is an autoimmune disease with a genetic predisposition. HLA genes (especially HLA-DRB1*15: 01) play an important role.
- Epilepsy: There are many forms of epilepsy with various genetic etiology. Mutations in genes encoding ion channels (for example, SCN1A, KCNQ2) and synaptic proteins can lead to the development of epilepsy.
- Huntington disease: It is caused by the expansion of trinucleotide repetitions of CAG in the HTT gene.
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Psychiatric diseases.
- Schizophrenia: It is a complex disease with polygenic heredity. Many genes make a short contribution to the risk of schizophrenia. Studies of the associations of the whole genome (GWAS) revealed many genetic options associated with schizophrenia.
- Bipolar disorder: It is also a polygenic disease. Genetic factors play an important role, but it is difficult to identify specific genes.
- Depression: Genetic factors contribute to the risk of developing depression, but their exact role has not been fully studied.
- Autism: Autism is a complex of developmental disorders, with a strong genetic predisposition. Many genes related to autism, including Shank3, NRXN1 and PTEN, have been identified.
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Autoimmune diseases.
- Rheumatoid arthritis: HLA genes (especially HLA-DRB1) play an important role in the development of rheumatoid arthritis.
- System red lupus (SLE): It is an autoimmune disease with a genetic predisposition. HLA, IRF5, Stat4 and others participate in the development of SLE.
- Crohn’s disease: It is an inflammatory bowel disease. NOD2, IL23R and ATG16L1 genes are associated with the development of Crohn’s disease.
- Celiacia: It is an autoimmune disease caused by gluten. HLA-DQ2 and HLA-DQ8 genes play an important role in the development of celiac disease.
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Metabolic diseases.
- Phenylketonuria (FCU): It is caused by mutations in the PAH gene encoding the enzyme phenylalaininghydroxylase.
- Cykovyskidosis (cystic fibrosis): It is caused by mutations in the CFTR gene, encoding the protein of the transmembrane controller of cystic fibrosis.
- Galactosemia: It is caused by mutations in genes encoding enzymes involved in galactose metabolism (for example, Galt, Galk1, Gale).
- Wilson’s disease: It is caused by mutations in the ATP7B gene, encoding medical sporting atphase.
Section 5: Ethical and social aspects of genetic testing
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Advantages and risks of genetic testing.
- Advantages:
- Assessment of the risk of developing diseases: Allows you to evaluate an individual predisposition to certain diseases.
- Early diagnosis and prevention: Allows you to identify diseases in the early stages when treatment is most effective.
- Personalized medicine: Allows you to adapt treatment to the individual genetic characteristics of the patient.
- Family planning: Allows you to evaluate the risk of transferring hereditary diseases to offspring.
- Risks:
- Psychological distress: Obtaining information about an increased risk of developing serious diseases can cause anxiety, depression and other psychological problems.
- Discrimination: Fears about discrimination in the field of employment or insurance based on genetic information.
- False positive and false negative results: Genetic testing is not always accurate. False positive results can lead to unnecessary medical interventions, and false negative results can give a false sense of safety.
- Ethical dilemma: For example, questions about whether the genetic testing of children should be carried out on diseases that will appear only in adulthood.
- Privacy problems: Ensuring the protection of genetic information from unauthorized access.
- Advantages:
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Genetic discrimination and legislation.
- Genetic discrimination is discrimination of people based on their genetic information.
- There are fears that employers or insurance companies can use genetic information to make employment or insurance decisions.
- Some countries have adopted laws that protect people from genetic discrimination. For example, in the USA there is a law on non -discrimination of genetic information (GINA).
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Confidentiality of genetic information.
- Ensuring the confidentiality of genetic information is an important ethical issue.
- Genetic information should be protected from unauthorized access and use.
- It is important that patients understand how their genetic information will be used and who will have access to it.
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Genetic counseling.
- Genetic counseling is the process of providing information and support to people who consider the possibility of genetic testing or have received the results of a genetic test.
- A genetic consultant can help patients:
- Understand the risks and advantages of genetic testing.
- Interpret the results of a genetic test.
- Develop a plan for the risk of developing diseases.
- Make reasonable decisions on family planning.
- Cope with the psychological problems associated with genetic information.
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The future of genetics and healthcare.
- Genetics plays an increasingly important role in healthcare.
- In the future, the development of new genetic tests and methods of treatment based on the patient’s genetic profile is expected.
- Personalized medicine will become more common.
- It is important that genetic technologies are used ethically and responsibly, taking into account the rights and interests of patients.
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